Dockamon
Molecular docking & Virtual Screening Software
Engage in a comprehensive and versatile suite of structure-based drug design tools, specifically tailored for molecular docking and analysis
Features
Molecular Docking
Perform molecular docking using AutoDock Vina with an easy to use & modern user interface.
Docking Result Analysis
Easily analyze docking results using the Pose Viewer or Docking Results Table:
- Pose Viewer: Examine the poses of a docked ligand with 3D and 2D interactions.
- Docking Results Table: Analyze results of virtual screening or single ligand docking with predefined filters and automatic re-scoring options.
Protein-Ligand Interactions Visualization
Interactive 2D and 3D visualization of protein-ligand interactions, providing highly customizable features.
Virtual Screening (Pro Version)
Perform virtual screening by docking multiple ligands using AutoDock Vina.
Scoring
Score docked poses using a variety of scoring functions including machine learning scoring function (RF-Score V2).
Consensus Scoring (Pro Version)
Combine multiple scoring functions with adjustable weights to obtain a comprehensive evaluation of docked poses.
Protein & Ligand Structure Preparation
Prepare protein structures and ligands for docking, scoring, or other molecular modeling tasks with ease.
Essential Drug Design Features
A diverse set of essential drug design features includes:
- Protein structure management
- Chemical spreadsheet-like table
- Descriptors calculation
- Conformer generation, and more.
Easy to Use & Modern User Interface
CrescentSilico focuses on providing intuitive & easy to use modern graphical user interface.
Dockamon - Pro
Virtual Screening & Consensus Scoring
Unlock advanced capabilities with the Dockamon - Pro version, featuring the Virtual Screening and Consensus Scoring modules.
- The Virtual Screening module streamlines the docking process by automatically docking a vast set of ligands using Autodock Vina software. Results are conveniently presented for visualization in the Pose Viewer and Docking Result Table.
- Harness the power of the Consensus Scoring module, which employs a variety of scoring functions to re-score docked poses, including cutting-edge machine learning-based scoring functions.